Insertion junction: CLIP2.078493_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078493
Chromosome:chromosome 1
Location:2891146
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g017951 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACCCAGACCGCACTCGGCCGCACGCAGCACCTGCAGCGCCGGCAGCT
Internal bar code:GTTTAATGGGGTGTTCTAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTGCCACCTCATAGTG
Suggested primer 2:TAGGACGAGAAGGGGAAGGG