Insertion cassette: | CIB2 |
Side of cassette: | 3' |
Strand: | + |
Strain: | CLIP2.078495 |
Chromosome: | chromosome 3 |
Location: | 5080022 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre03.g180151 | (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold | 5'UTR | |
Cre03.g180200 | (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain | 5'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TTGTTGTCTTCAGCATACACATGCACTTACACATCGCATGGAAGCTTGAG |
Internal bar code: | CTTTACGAAGCATTCCCCGGTG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 870 |
LEAP-Seq percent confirming: | 100.0 |
LEAP-Seq n confirming: | 10 |
LEAP-Seq n nonconfirming: | 0 |
LEAP-Seq n unique pos: | 10 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | ACACACATGCGTCCACAGAT |
Suggested primer 2: | TTTTCGTTTGGCTTCCGCTG |