Insertion junction: CLIP2.078500_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078500
Chromosome:chromosome 12
Location:6606881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538801 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGTAGCTGTGGGTCACGCAGGGCTTCCACGTGCTGCACGCGCGGCAT
Internal bar code:TTCCAGGGGTGGACAGGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2627
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACTGGCACCTCCATCAC
Suggested primer 2:GCGGCAAGACACATATGCAG