Insertion junction: CLIP2.078506_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078506
Chromosome:chromosome 2
Location:4477603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106450 LCA1 (1 of 1) PTHR11440//PTHR11440:SF4//PTHR23070//PTHR23070:SF14 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED // PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE // BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED; AAA ATPase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATCCGTGCTGCTGTTCGGTCAACCAGCGCTGCCTTAAATACGCTTGC
Internal bar code:ATAGGTTTAGGGTTGGACTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4555
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTTTGAGGGTTGGGCG
Suggested primer 2:CTTGTCTGCTTGCACACCAC