Insertion junction: CLIP2.078514_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078514
Chromosome:chromosome 12
Location:3461517
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g497350 PPR13 PentatricoPeptide Repeat protein 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGACATGTGCTACCATACATCATACGGTAACGCATATTTTGTGTGTGT
Internal bar code:GGTGGTGTGGAAGGCGTCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:32.2581
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCTTCGTTTTGTTGGG
Suggested primer 2:CATACCCCCTCCCACCCATA