Insertion junction: CLIP2.078525_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078525
Chromosome:chromosome 11
Location:3298471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476450 (1 of 2) PTHR22807//PTHR22807:SF34 - NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING // METHYLTRANSFERASE NSUN6-RELATED 3'UTR
Cre11.g476500 PAO7 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGACACCATTGCGGGTTGCGCCTCGTGGGTCGTGACGTCGTGACGTT
Internal bar code:AAGCACTGGTTGCTGAAACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1616
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCTTACGGAGGCAGGCC
Suggested primer 2:AGATTAGAGCGAGCGTCTGC