Insertion junction: CLIP2.078527_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078527
Chromosome:chromosome 11
Location:2643280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095079 (1 of 2) IPR000104//IPR011705 - Antifreeze protein, type I // BTB/Kelch-associated 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTATTGGATGTGCCACTGTGGCTTACTTAAGCTGTCATCCCTGGTGCA
Internal bar code:CTTCGGTCCGTACGACTGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1869
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGATTTCGGTTGCGGGTA
Suggested primer 2:CTGTGGGCGGGAAGGTTTAT