Insertion junction: CLIP2.078532_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078532
Chromosome:chromosome 6
Location:7692606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302400 TNP17,CSB31 {"Probable transposon-derived protein of Chlamydomonas-Specific family B; (1 of 1) IPR000104//IPR010095 - Antifreeze protein, type I // Transposase IS605, OrfB, C-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGATTTGCGGGGATGCCAAAGGCCCCCAACATAGAGGCGTGTGCTT
Internal bar code:TTGATAACGGACTTACCGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4233
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTACAGTGCAGTCCGT
Suggested primer 2:GCTTTAGCGGAACCATGCAG