Insertion junction: CLIP2.078535_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078535
Chromosome:chromosome 13
Location:983664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCGGGGGGAGTGCGCCCCATGCACGCGGGCGGGCAAGCGGGTGGCAC
Internal bar code:AAGTGTGGCCCGGGCTACCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2730
LEAP-Seq percent confirming:63.0952
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTGGCTGAATGCTGAA
Suggested primer 2:TCCTAAACCGTCGCTTTGCT