Insertion junction: CLIP2.078541_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078541
Chromosome:chromosome 13
Location:3936416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801566 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAAGAGGCACCCCACGCATCCACCTTCACTCAGTCCATAGGAACCGA
Internal bar code:GCACTCTGAGTGGCACAGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3687
LEAP-Seq percent confirming:11.2676
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGACGCCAGCATAT
Suggested primer 2:CTCGTCACCTGTCCCTTCAC