Insertion junction: CLIP2.078544_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078544
Chromosome:chromosome 17
Location:434701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802025 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGTTTGAGCGGGTGCAGGTGTGGGCGGGTGCACATAACATAGCATC
Internal bar code:TAACGCGATTTCCACGTATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2889
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCGAACGTGCTGATGAA
Suggested primer 2:GCTGCGCTGTCCCATATTTG