Insertion junction: CLIP2.078545_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078545
Chromosome:chromosome 10
Location:2307008
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g434350 CTR2 CTR type copper ion transporter; (1 of 2) PTHR12483//PTHR12483:SF27 - SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS // COPPER TRANSPORTER 1A, ISOFORM C-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTCTGCATCTGGCTCGGAACAATGACAAGTCGAAGCATTCGACAACC
Internal bar code:GGGATATCATGTAGGGCGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3767
LEAP-Seq percent confirming:39.3939
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTTCCTGATTCACCCC
Suggested primer 2:GGACCTGTTCACCATGCTCA