Insertion junction: CLIP2.078548_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078548
Chromosome:chromosome 13
Location:77455
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g801505 (1 of 2) PTHR10642//PTHR10642:SF7 - RIBONUCLEASE H1 // SUBFAMILY NOT NAMED intron
Cre13.g801506 (1 of 2) PTHR10642 - RIBONUCLEASE H1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCATGTCAGCTTGTGATGCTGTGGATGCTGCGGGGGCCCACTGCTCG
Internal bar code:TACGACTAACTCGGTTTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTACAACAACTGGCCGG
Suggested primer 2:ATGCAGAACACGTCCTCCAG