Insertion junction: CLIP2.078549_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078549
Chromosome:chromosome 11
Location:79035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467530 (1 of 31) IPR016187 - C-type lectin fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAACATGCATCCAAACATCACGTCTGGTGAGATGTGTAATATGGGTTT
Internal bar code:GTTGTGTAGCACCATGTGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1472
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCATCGGCAATGCAGTGG
Suggested primer 2:GATCCCGCATTTGCATCACC