Insertion junction: CLIP2.078554_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078554
Chromosome:chromosome 7
Location:2109757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326300 5'UTR
Cre07.g326350 (1 of 54) IPR001680//IPR017986 - WD40 repeat // WD40-repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAAAATTTGCATGCAGACCAACATGCAGACTGCAGAGCGTTTTGGAT
Internal bar code:TTCATTCTGGGGATTCTGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTCGACACAAACACGCT
Suggested primer 2:AGTTGGGGCATCACTAACCG