Insertion junction: CLIP2.078560_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078560
Chromosome:chromosome 1
Location:1727659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGATACCACCATATCTACGGAGCGCTAGATCGTAGTCCTGTGTGTCC
Internal bar code:GTTAGCCGTACTGAAAGCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1624
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAGCCGTTGGATCGATC
Suggested primer 2:CATACTATGCGCCTCAGCCA