Insertion junction: CLIP2.078561_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078561
Chromosome:chromosome 8
Location:234608
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g358560 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATAAACCGTTCAGTGTCTTCACGATGACCCCTCGCCCTCCCCCTCCGC
Internal bar code:TGCAGGGATTTAGTGGATCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACACGAACCCCACGTAT
Suggested primer 2:GCTCTGCCCCATGTAAACCT