Insertion junction: CLIP2.078579_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078579
Chromosome:chromosome 13
Location:3998756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590400 (1 of 1) PF00041//PF04969 - Fibronectin type III domain (fn3) // CS domain (CS) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCGGGAACTCTCCTTCGCCAGCGCGATGGGGCGCAGTCTCAATGCAG
Internal bar code:TAATGTCTTTTTTTGCATTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1530
LEAP-Seq percent confirming:4.44444
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCGCAACAAAGAAGAA
Suggested primer 2:AATGGCAGCCTCAGTAGCAG