Insertion junction: CLIP2.078580_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078580
Chromosome:chromosome 12
Location:3208901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGTGGCCATGCGGCCGTCCATGGCGCAACGGTGGTGTGTGAAGACG
Internal bar code:CGCAGTCGGCAGTGAATCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3213
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGGCGTGCTCTTGTGGT
Suggested primer 2:ACAAGTACTTGACTGGGGCG