Insertion junction: CLIP2.078587_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078587
Chromosome:chromosome 3
Location:5737494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187250 (1 of 1) PF05514 - HR-like lesion-inducing (HR_lesion) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGCAATCAGTTCGTCGCGTAGACAGTCTCGGTCTTTATCTCCCAA
Internal bar code:TTGCACTGGGTCATTCTCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3280
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTCACTTGTCACCACGC
Suggested primer 2:CTTAAGCAGTGCTGGAGGCT