Insertion junction: CLIP2.078605_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078605
Chromosome:chromosome 17
Location:3146737
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g720750 TRF4 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAGAACACGTGCTGGCGCTGCTGCCCCTGCTGGTACCCCTGCTGCTG
Internal bar code:GGCGTGCTGGCTCCAGGACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:103
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGATGAAGAGTCGCCTCG
Suggested primer 2:GCGTCGTCTCCTCATACAGG