Insertion junction: CLIP2.078609_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078609
Chromosome:chromosome 12
Location:5427024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529500 RRM11 (1 of 1) 2.1.1.167 - 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase; Putative ribosomal RNA methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCACAGCGGACTGCACTGACTGACCACGCGAGCATCTACAGCTCTCG
Internal bar code:CGTGGCGCAGTTAGAACGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4850
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAAGTCCAAGATGCGCG
Suggested primer 2:GCACCATATGTCGCGTTTCC