Insertion junction: CLIP2.078609_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078609
Chromosome:chromosome 12
Location:5427027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529500 RRM11 (1 of 1) 2.1.1.167 - 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase; Putative ribosomal RNA methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATCTAGGTGTGTTAGGCCCGGGTCCAAGGTAGACCCACAGCTGCAAC
Internal bar code:GAGGTAGGTAGAGCCTAGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3123
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCATATGTCGCGTTTCC
Suggested primer 2:CATGAAGTCCAAGATGCGCG