Insertion junction: CLIP2.078613_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078613
Chromosome:chromosome 6
Location:7508865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301000 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGGCAAGCTGTTCCCATGCCCAACTACTTGTCAACACAGTAAACGAG
Internal bar code:AATCGGCTTTCCGAAGTACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3368
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTTGGTGCTGCAATGCA
Suggested primer 2:CATCGTATCACCATCCGGCA