Insertion junction: CLIP2.078613_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078613
Chromosome:chromosome 6
Location:7508893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301000 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTATAGGGGCCGAGCTCTTTTGCTGAGGAGTGAATCAACCAGGCCA
Internal bar code:AATCGGCTTTCCGAAGTACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1934
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGTATCACCATCCGGCA
Suggested primer 2:GTTCTTGGTGCTGCAATGCA