Insertion junction: CLIP2.078614_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078614
Chromosome:chromosome 1
Location:4533218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031050 (1 of 1) K15172 - transcription elongation factor SPT5 (SUPT5H, SPT5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGATAGGCAGTGCTAGGGCTTGCCGATGTAGGCTTCTCGCCTGTCG
Internal bar code:CGAGTGAAAAGACTCAACATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:48.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGATGCACATGCGAATT
Suggested primer 2:ACCTGCATGCGGGAAAACTA