Insertion junction: CLIP2.078621_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078621
Chromosome:chromosome 10
Location:2199512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433600 (1 of 1) 1.5.1.20 - Methylenetetrahydrofolate reductase (NAD(P)H) / N(5,10)-methylenetetrahydrofolate reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATTCCAACTGCCCTTTCCGCCGCGACCTCTCCCGCTCCCGAATCACA
Internal bar code:TTTCATTCGTTCCATCTCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTACCCAGACACAACGA
Suggested primer 2:GCTTGAAACGAACCGTGCAT