Insertion junction: CLIP2.078624_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078624
Chromosome:chromosome 9
Location:2506987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392950 TMG12 tRNA (guanosine-2'-O)-methyltransferase; (1 of 1) PTHR12029//PTHR12029:SF55 - RNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACTAGAACAATCACACCCCAACCCACTGTGACTTCTGTCCTGGATTC
Internal bar code:ACAAACTGTAAAAATATTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAATGAGCTACCGTCCCC
Suggested primer 2:GTAGTATGTGCCTGGCAGCA