Insertion junction: CLIP2.078633_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078633
Chromosome:chromosome 7
Location:3659701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337450 GT90F9,GT90-9,CGL75 Glycosyl transferase GT90 family protein 9; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 3'UTR
Cre07.g800819 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTAATGTCATTTTGTTCCGGTAGATCGTTAGTTCGATGTGTACAAGTA
Internal bar code:ATGCAAATGCGGATAGAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTTGCCATGTCCCAT
Suggested primer 2:AGGTACTTGTCCATGCAGGC