Insertion junction: CLIP2.078638_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078638
Chromosome:chromosome 11
Location:4321767
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g482550 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGACCGGCTGCAGGAGGTGATACGCGCGCGGGGGGCCCCACCACTG
Internal bar code:CACATTGCGAGATCGCGCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCGATTGGATGGGAAA
Suggested primer 2:GCATCGTCCCCTTCTACCTG