Insertion junction: CLIP2.078647_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078647
Chromosome:chromosome 8
Location:65545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358521 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATGGCACGCATGCGCATGCATGCCCACAGTGCTAGCTAAATGCATTC
Internal bar code:AAATAAAGGGTCCTGGGGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCGCGCTTGTTTTTACA
Suggested primer 2:CAGTAGCCGTGGAGCCTATG