Insertion junction: CLIP2.078648_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078648
Chromosome:chromosome 6
Location:8005029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACCGCCAGAACCCTGGGTCCCCTGGTCAGAGCGGGTCAGAGTACCC
Internal bar code:CAGGTGATATTGAGTGCCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:792
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTCTATTACGGGAGGC
Suggested primer 2:AGCTGTTTTTGACGCGTGTC