Insertion junction: CLIP2.078655_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078655
Chromosome:chromosome 5
Location:532827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGAGCAGGGGAGGGAACGAAGCTCCCTCCCCTGTAATGTTGTGGAGG
Internal bar code:AATTTAGCGAACTATATTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2170
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAGGGCCTGCGACTAGTT
Suggested primer 2:TGCTCGAAATGTCATGCCCT