Insertion junction: CLIP2.078662_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078662
Chromosome:chromosome 13
Location:415405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564766 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCGGGGAAAGCCCAGCGGCGCCATGGCGGTCGGAGTGATCGGGACCC
Internal bar code:AGTTGCGGACAGTCCCTCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1192
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTGCGAAGGAAGGAAG
Suggested primer 2:ACTACCTGCATTGGAAGGCC