Insertion junction: CLIP2.078662_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078662
Chromosome:chromosome 13
Location:415412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564766 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCGAACCAGCCGTCCATGCTGATGGGCTGACCGCACGTGGCAGAAG
Internal bar code:AGTTGCGGACAGTCCCTCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2773
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACCTGCATTGGAAGGCC
Suggested primer 2:CCTCCTGCGAAGGAAGGAAG