Insertion junction: CLIP2.078674_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078674
Chromosome:plastome
Location:272
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATAGGCAGTGGCGGTACCACTGCCACTGGCGTCCTATTTTAATACTCC
Internal bar code:CGTGCCATTACGTATGTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGACGTCAGTGGCAGTT
Suggested primer 2:CCCCTTCGGGCAACTAAAGT