Insertion junction: CLIP2.078678_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078678
Chromosome:chromosome 3
Location:5076392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180100 UNG2 Uracil DNA glycosylase; (1 of 1) 3.2.2.29 - Thymine-DNA glycosylase / Uracil/thymine DNA glycosylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCGCCTCTCAGCCCGCCATGTCTTCTGCGCCGCCCGCTGCCGCTTC
Internal bar code:CGTGACGATTGTGTGTTCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGAGCTGATGAACGTG
Suggested primer 2:GCAGGACCTCGTGATGTAGG