Insertion junction: CLIP2.078679_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078679
Chromosome:chromosome 8
Location:3908821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTCGGGGCTGCATGAGGCTGTCAGCCCATCCGAGGCAAATGCCTTGG
Internal bar code:TGCTGCTAGCTAGAATATAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTGACGCATGTACACAC
Suggested primer 2:GGGTTCACAGGTCCTAAGCC