Insertion junction: CLIP2.078684_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078684
Chromosome:chromosome 3
Location:6784600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196900 (1 of 1) PTHR10809:SF6 - AT11025P-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGCCGATGCCACCTTCGGCACGCCTCAACCCCGGAACCGCCGAACCGT
Internal bar code:CCGAAAAACTGGAGGCAACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3734
LEAP-Seq percent confirming:52.1739
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACAGTTGTCAACAGCC
Suggested primer 2:CTGCATAATGACCTGCACGC