Insertion junction: CLIP2.078688_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078688
Chromosome:chromosome 11
Location:2267473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095146 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAACCCGATGCCCCAGCCCGACACGAGCACATGTTTCTCCCAAGCTT
Internal bar code:GATGTCGGACGTCGTGGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1074
LEAP-Seq percent confirming:61.1765
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACAAGTAAAGGACGCGG
Suggested primer 2:GACTACAAGCTGCAAGGGGT