Insertion junction: CLIP2.078689_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078689
Chromosome:chromosome 9
Location:469463
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre18.g749197 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGCGACGGCAATGGTGTCAGGACGGTGACTTTGAGTCCGCCACGG
Internal bar code:AATGCAAATCAGGCTGATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:99
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCACTCGTACATGTGT
Suggested primer 2:GATGGTTCCAGTCTCCCTGC