Insertion junction: CLIP2.078695_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078695
Chromosome:chromosome 9
Location:666523
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g404750 SRR2 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTCCCGACGGTGACATGGTGGGATGCTATGTGAACGCAAACTACCTA
Internal bar code:CATGATGTTAAGCGGCGATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:23.913
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCATAGAGGTAGGTGGC
Suggested primer 2:CATGCAAATGTCCACGCACA