Insertion junction: CLIP2.078697_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078697
Chromosome:chromosome 17
Location:434021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698850 ISA2,STA8 (1 of 2) 3.2.1.68 - Isoamylase / Debranching enzyme; Isoamylase-type starch debranching enzyme 2 3'UTR
Cre17.g802025 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACTGCTCCGGCGTGTGGGACGCCGCGTTGGCAAGAGCCACGGATGG
Internal bar code:TGATCCTATCCTATATGGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2211
LEAP-Seq percent confirming:85.4839
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGACACAGGCAACAAGC
Suggested primer 2:AGGACAGGTTGATGCCAGTG