Insertion junction: CLIP2.078698_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078698
Chromosome:chromosome 3
Location:7536632
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g205300 EXN7 (1 of 1) IPR000104//IPR002562//IPR012337 - Antifreeze protein, type I // 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGGGACTCACTTCTTCCGCTCCACCCATTCCAACAACCCGTTGGGC
Internal bar code:TTTATTTCACACCAAACGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:403
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCAAATTGCTGTGGCG
Suggested primer 2:GGCACTGGAGTCTTCGTCAA