Insertion junction: CLIP2.078701_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078701
Chromosome:chromosome 16
Location:5870663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679500 NUOB8 (1 of 1) K03946 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 (NDUFA2); NADH:ubiquinone oxidoreductase 11 kDa subunit 3'UTR
Cre16.g679550 FAP277 Flagellar Associated Protein 277; (1 of 1) K13963 - serpin B (SERPINB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACCCGCAAAGGTGGTGCTAAATTCCAAAGTGGCGTACACTCGAACCTC
Internal bar code:TACCGAATCGGAGTCATGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1101
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTCAAGCAGCTCTTCC
Suggested primer 2:TGGATGCATCGATGGTACGG