Insertion junction: CLIP2.078704_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078704
Chromosome:chromosome 4
Location:1282049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214750 VMP7,VMPL2 (1 of 2) PTHR21136:SF86 - VESICLE-ASSOCIATED MEMBRANE PROTEIN 7; Endosomal R-SNARE protein, VAMP-like family (R.III) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTACCTGGTCGGAACCATGCCGACACACAAGGCACAGGAGCCGCGCGC
Internal bar code:TTTTGTGACAGGTATAAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGCCTGTCTTCCTCGC
Suggested primer 2:GTCGAGCCGCGTTCAGTATA