Insertion junction: CLIP2.078707_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078707
Chromosome:chromosome 3
Location:2727256
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGGCCCGAGCCGTCCCTGGCACCGCCGCCTCCTGACCGTATCCGCCC
Internal bar code:CCCATAGCATGAAAGGAACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:85
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACGTGGGAATTAAGGGG
Suggested primer 2:GTGGCCAAGTACTCGTTCCA