Insertion junction: CLIP2.078708_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078708
Chromosome:chromosome 7
Location:5733757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353000 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGATTGAGGTGACAGGGTAGCGAGGCGCAGCGCTCGGCCGAACCATG
Internal bar code:CAGTCAGGGTGTATAATAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTCTGCGGATTTCATGC
Suggested primer 2:ATAAACGTGACAGGCGCAGA