Insertion junction: CLIP2.078708_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078708
Chromosome:chromosome 7
Location:5733771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353000 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCTCAGCCCATTGTCCAGCTGTACAAAGCTGAGCCCCCTGAACGAAG
Internal bar code:CAGTCAGGGTGTATAATAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:6372
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAACGTGACAGGCGCAGA
Suggested primer 2:GTCGTCTGCGGATTTCATGC