Insertion junction: CLIP2.078712_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078712
Chromosome:chromosome 7
Location:239914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313700 TSX2,GTS2,TSE2,GTS2:GLTX Glutamyl/glutaminyl-tRNA synthetase; (1 of 2) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase 5'UTR
Cre07.g313750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTAACATGTGCTCCGCAGGACATGCAATTCTAGGGCGCGATTGGGGA
Internal bar code:TTGGAAGATTACTGTCCATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4756
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCAGGGCTTTAGCAACT
Suggested primer 2:CTACAACAGTATGCGCGCAC